rs247528772 SNP Detail

Summary

• ID
  rs247528772
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45978948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGCTACAT AGCCAGTCTC CCACTCTGTA
  GGTAGGCAGT GTAGAGGGAA ATTTCATTTA TTGTTTGGAG AATTAGACAA CTTTTACAAC
  ATGCTTAGTG ACCAAGAATT CTGATTTTTA ACTCCACACC AGAGCCTCCA GTGAAAGCCG
  Y
  CTTTGAGGTT CTAGTAGGAG ATTATAATGG CTTCTGGTCA GCTAGCTCCC AGCTGTGGTC
  TTTATAGGGC AGAGGTGGGA ACTCTCAGCG GTTGCCAGCC GCTCTTGCCT TGGGCTGGGC
  CTTGGAGGAA CTCAAGGGAA ACTCCCAGCC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322943969	CHEV_9_45875733	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247528772					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45978948 () rs orientation: forward

Symbol	Name	Function Class
Gm46110	predicted gene, 46110	within coordinates
Rr209232	regulatory region 209232	within coordinates
Rr383304	regulatory region 383304	856 bp upstream
Sik3	SIK family kinase 3	within coordinates