rs247556876 SNP Detail

Summary

• ID
  rs247556876
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGAGCTG GCTTACAGGG
  TCAGAGGTTC AGTCTATTAT TGTCAAGGCA ATAACATGAT AGTGTCCAGG CAGGCATGGT
  GCAGGCAGAG CTGAGAGTTC TATATCTTCA TCTCAAGGCT ACTAGTGGAA GCTAGGGTGA
  GGGTCTTATG CCCACACCCA CAGTGACACA CCCACTCCAA CAAGGCCACA CCTCTAATAG
  W
  GCCACTCCCT GGGCCAAGCA TATACAAACC ATGACACTCC CTTTATGTAG GAAGGGCATG
  CACTAAGCAC CTTGTGCAGT GGGTACTCTT TTTACATGAC CAGATTACGA TACTACTCAG
  GGCAGGGCAC CTCACCAAGA GAGAAAAGAA AAAAAGCCGT TTTACTGTAG TGGTTCGAAT
  GAGAACACAG ACATCAGGTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325752830	CHEV_19_21671036	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247556876					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573910 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	767 bp downstream
Gm38486	predicted gene, 38486	344 bp upstream
Gm59243	predicted gene, 59243	within coordinates
Rr364167	regulatory region 364167	1492 bp proximal