rs247558643 SNP Detail

Summary

• ID
  rs247558643
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGAATTTT GCCTGACTGT
  GTAGCTGGTA GGCAGAGGCA TCCTGGACCT CCCAGTTTTG TGCCATGAAA GGCTACATGC
  AGGTCTCAGA CCCCATGAGA GAAGTTTCTT TGTGCAGTGA GCAGAACTTG TCTCTAAGTG
  AAACTATACC ACGCCCACAT GGGCCCCACA AGATTCAAGG ATTTTTGTGG AAGTTGGAGC
  R
  AAATGACTGT AAGAGCCAGA AGTCTAGAAG AATAGGACCA AACAATGCCT TCTGGGTATG
  GTAGGACCTC TGCTCTAGTG AGCTCACAGA CGCTGCAGTG AACCCAAGAT AACACCAAGC
  TCAAGATAAC CAACATTCCA GCACTGGGGA AGGGATGGTG AGCCCTAGCC CCTAGTTGAG
  GAGTTATTGG CAGCTGATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362838	CHEV_17_32821650	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247558643					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903679 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	926 bp upstream
Rr339615	regulatory region 339615	921 bp proximal
Tssr143733	transcription start site region 143733	880 bp upstream
Tssr143734	transcription start site region 143734	905 bp upstream
Tssr143735	transcription start site region 143735	934 bp upstream
Tssr143736	transcription start site region 143736	950 bp upstream
Tssr143737	transcription start site region 143737	1388 bp upstream