rs247586009 SNP Detail

Summary

• ID
  rs247586009
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116515417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACTCCGA GGACAGGTTT
  TGCACCATGT AAGAAGAATG AGAGGGTAAC AGCCATACCT AAACAAAACT TTGAAGAAGA
  TAAAAGTTAA AAGTCTTTTT TTTTTTTGTT CTGTGGCGGT TTGAATAAGA ATGGCGTCCA
  TAGGCTCGTA GATTTGAATG CTTAGGGAGT GGTCTTAGGA CACTACTATG TCTTTGTTGA
  R
  GTAGGTGTGG CCTTGTTGGA GAAAATGTGT CACTGGGGTT TCAAATGCTC AAGCCAGGCC
  CAGCATCTCT CTCTTCCTGC TGCCTGCAGA GGCGGAGGTA GAACTCTCAG CCCCTTCTCC
  AGCACCAGGT CTGCCTGCCA CCATGCTTCG CCATGATGCT AATGGACTAG ACCTCTGAAA
  TATAAGCCAG TCCCACTTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323490251	CHEV_10_116116568	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247586009					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116515417 () rs orientation: forward

Symbol	Name	Function Class
Gm26579	predicted gene, 26579	209 bp downstream
Rr385348	regulatory region 385348	within coordinates