rs247589862 SNP Detail

Summary

• ID
  rs247589862
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88862035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgtttgtt tgtttgtttg agacagggtt
  tctctgtgta gccctggttg tcctggcact cactttgtag accaggctga cctcgaactc
  agaaatctgc ctgcctctgc ctcccaaatg ctgggattaa aggtgcgcgc cactatatcc
  R
  gctATTTGCT TTTTCTTTAT CAAGTAGCCA ggctggggga atgtctttca gtggtgtggt
  gctcccctga cgtgtacagg gccccttgtt cactctctag cactacaaaa TAAGTAAATA
  GCATTGTCAA AATCATTGTA CAGGAGACCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783374	CHEV_11_88832523	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247589862					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88862035 () rs orientation: forward

Symbol	Name	Function Class
2210409E12Rik	RIKEN cDNA 2210409E12 gene	1448 bp upstream
Gm10367	predicted gene 10367	1167 bp downstream
Rr237596	regulatory region 237596	166 bp proximal
Rr386438	regulatory region 386438	1961 bp downstream
Rr402857	regulatory region 402857	861 bp downstream
Tssr104058	transcription start site region 104058	946 bp downstream