rs247610843 SNP Detail

Summary

• ID
  rs247610843
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:3548234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGAAAAGA TGATGGTTAG GAGACAGAAA
  AAAGAGGAGG ATCACAAACA GTTTATAGGA AGAAGAGGCC CCATCCCCTG CTGGTCTACA
  CGGATTTCTT GGCTGTTAAC TTCCCACAGA CTCTCCAGGA CGGGCGCCTC TCTCATTTGG
  R
  ATATCTTTCT TTTTAATCTA CTGTTTTCAT TTTGTGAAAT TAGCCTTTGG GTGTTTCGAG
  AATGGCTTTA TGAACTAAAG CCATCTGCTA ATATTGTGTT TCTTGTCTTT TCCTCCAACG
  TTTTTACGAG CCGTCGAAGA TGGGGTACTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325087891	CHEV_16_3730370	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247610843					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:3548234 () rs orientation: forward

Symbol	Name	Function Class
Tdgf1-ps1	teratocarcinoma-derived growth factor, pseudogene 1	140 bp upstream
Tssr136822	transcription start site region 136822	340 bp downstream
Tssr136823	transcription start site region 136823	68 bp downstream