rs247611750 SNP Detail

Summary

• ID
  rs247611750
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93120922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTGAAAAT AAAGGTATTT
  CCTGCTGCTT CTGGGGATAT TTTTCTTCTC ATTCCCCAAA TACCATAATC CCTGGTCTTC
  GGCATGCACC CCACCCCTGA GCGGCTTCCA GATCAGCATC CCCCAAGCTG ATGCCTCCTC
  CAGACCATGC ATGCCCTGCC TGATGAAATG GCTCAGGGTC AGCCAGCCCC CCCCCCCCCC
  M
  CCATGCATCA TAGGCTGGCC TCAAAGCTCT CAAGCTTCCT TGAGGTTTAT CTCCCATGAC
  TTCCTAAAAG AAAATCCTTA CGGCTCTGAG TTTGGACAGC ACTGATCTGG AGCAATCTGT
  TGTCACAGAA AGCTCCATGG GACAATACCC AATGAGAGCT GCAGAGAAGA CCCCGCTGAT
  AATCACAGTG CCCTGGTAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57L/J	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
ss354851415	MGP_WTSI_2_93130734	EVA_MGPV3	EVA_MGPV3	f	SNP	A	C	A	A	A	C	A	A	A	A	A	A	C	C	A	A	C	C	A	A	A	C	A	C	A	A	A	C	C	C	C	C	A	C	A	C	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57L/J	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
rs247611750					SNP	A	C	A	A	A	C	A	A	A	A	A	A	C	C	A	A	C	C	A	A	A	C	A	C	A	A	A	C	C	C	C	C	A	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss354851415	MGP_WTSI_2_93130734	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93120922 () rs orientation: forward

Symbol	Name	Function Class
Rr561147	regulatory region 561147	within coordinates
Tspan18	tetraspanin 18	Intron