rs247630239 SNP Detail

Summary

• ID
  rs247630239
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70412778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGG TTAGGATCCC TTATCACCTA
  C
  ATAAAAGCAG TGTGGGCACC TGATG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323735942	CHEV_11_70335454	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247630239					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70412778 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3187	CpG island 3187	1257 bp distal
Gltpd2	glycolipid transfer protein domain containing 2	1216 bp downstream
Rr450319	regulatory region 450319	1712 bp distal
Rr450320	regulatory region 450320	1417 bp proximal
Rr450321	regulatory region 450321	1617 bp proximal