rs247639674 SNP Detail

Summary

• ID
  rs247639674
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70896404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTGAATA GAGCTATAGC
  CAAATATCCT CCCTCATTCA GGTTTGCCGT CGTGGTGTCA CAAAAGAATC CCTTAACCCG
  AGACCCTGAG AAACAGCTTC TGTACTCAAG GGCACCAGAC CTGCAAACCA AACTAAAGCA
  AAACAAGAAG ACATTCTAAC ACCATCCCCA AGTGTTCCTG AAGGCAATGC TGAAATAACT
  S
  TGGAAATGCT GAGCAGGACC AGTTATGTTA CGATATTCAT GGGAACTAGA GTCTAGTAAA
  GTGGTGCACT CACTGTTAGA AGTCACTCAG TTCATGTGGG CAACAGCAGA GGCAGGCTGT
  GCTGTGTGTC TCAGCCTTAG GATGATATAC CTGCTGAAGT GAGAGGTAAG GAATTTGGAT
  AATTAAATGA CCTGATTAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416629	CHEV_13_70887163	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247639674					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70896404 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Rr284828	regulatory region 284828	1261 bp distal
Tssr123156	transcription start site region 123156	1797 bp downstream