rs247657451 SNP Detail

Summary

• ID
  rs247657451
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43057173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agacagaca gacacacaca cagacacaca
  gacacataca cacagacaca cacagacaga cagacacaca cacatacaca cCTTGCACCC
  TTTAGGTTGC TTGGTTCCTA GTAACATCGT CAGCCCCAGA TATGGGAAAC CTCATCAACG
  M
  ATAAATTACA AGTGGGAAAT TCAGTTCTCT GACTGAAGAG GAAGGACAAG CGGGGAACTG
  TGTTGAATTG TATTGAAGCC TGTGGGTACT TTTAGAGTTC AAAGTGTCAG TAGCTCACAA
  GGGAGGATGA AGGGGTAGAA GACCAGTCTA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322196843	CHEV_7_50663119	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247657451					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43057173 () rs orientation: forward

Symbol	Name	Function Class
Rr645953	regulatory region 645953	within coordinates
Rr645954	regulatory region 645954	466 bp proximal
Siglecg	sialic acid binding Ig-like lectin G	450 bp upstream
Tssr65984	transcription start site region 65984	438 bp upstream
Tssr65985	transcription start site region 65985	465 bp upstream
Tssr65986	transcription start site region 65986	479 bp upstream
Tssr65987	transcription start site region 65987	513 bp upstream
Tssr65988	transcription start site region 65988	525 bp upstream
Tssr65989	transcription start site region 65989	733 bp upstream
Tssr65990	transcription start site region 65990	770 bp upstream
Tssr65991	transcription start site region 65991	1503 bp upstream
Tssr65992	transcription start site region 65992	1514 bp upstream
Tssr65993	transcription start site region 65993	1547 bp upstream
Tssr65994	transcription start site region 65994	1660 bp upstream