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rs247710271 SNP Detail
Summary
  • ID
    rs247710271
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr15:100979069 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          GGAGC AGGTGGGGCA AGGAAAGAAA
    K
    AAAGGGCCCC AGGGAAGCAT GGGTG                                      
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325085186 CHEV_15_100911619 CHEVERUD SCREENING_POP f SNP G T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs247710271 SNP G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:100979069 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi7765 CpG island 7765 1658 bp distal
Gm53912 predicted gene, 53912 within coordinates
Gm62031 predicted gene, 62031 1143 bp downstream
Rr509902 regulatory region 509902 658 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory