rs247799130 SNP Detail

Summary

• ID
  rs247799130
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128203261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGACCCTT TGCAGCAACG
  AGTGTTCATC ACTGAGCCAA CTCTCCAGTC CCTTATAGTT TAAATTTTTT AAAGCATTTT
  TGCTATAGCT GGACATGGTG GTGCACGCCT TTAATCTCAG CACTTGGGAG ACCGGCCAGC
  CAAGTCTAAA TAATGATACC GATTATCAAA ATAAAACAAA AGCCTGACAT CCTGGTAGCC
  R
  GTAAAGTCCA TTTAGTCCCA GTGCTTAGGA GGCAGAAGCA GGCAGATCTC TGAGTTTTAG
  CCCAGCCTAG ACTACATAGT TCCAAGGTAG ATACCCAGAG GTATGTCTTG AGACCTTGGC
  TCAAACAACA ATAACAAAAA GCTGTGACTT AATTAAGTCC TGTAATAAGT GGTTTCTTAG
  CATGTTCAAT CCCCAGCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323533356	CHEV_10_127804448	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247799130					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128203261 () rs orientation: forward

Symbol	Name	Function Class
Coq10a	coenzyme Q10A	within coordinates
Cpgi2395	CpG island 2395	691 bp proximal
Rr224459	regulatory region 224459	139 bp proximal
Rr369103	regulatory region 369103	1569 bp upstream
Tssr99854	transcription start site region 99854	1284 bp downstream
Tssr99855	transcription start site region 99855	1498 bp downstream
Tssr99856	transcription start site region 99856	1551 bp downstream
Tssr99857	transcription start site region 99857	1690 bp downstream
Tssr99858	transcription start site region 99858	1730 bp downstream