rs247839905 SNP Detail

Summary

• ID
  rs247839905
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128783579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcttaacac agaaacacga ggcaggaaca
  tcactggctt actgtctgga ttgactactc agtgggcttt ctcatacagc tcaggaccac
  cagctggcca tagtgagcag ggctattttc tatcaattaa caatgaagac aggccaattt
  T
  atccaaccag ttcttcattg atgattctcg gctgtgccaa gctgacagtt aatgctagct
  aggacaGTCA AATATGCTAA GGGTAGGGAG TGAGACTCAG TTATTTAAGT TGTTGGTAGC
  CATTTACCAC TTATGTGGCT TCAAGACCTG                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319967628	CHEV_1_130752419	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247839905					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128783579 () rs orientation: forward

Symbol	Name	Function Class
Rr372000	regulatory region 372000	305 bp downstream
Rr417836	regulatory region 417836	1207 bp proximal