rs247844924 SNP Detail

Summary

• ID
  rs247844924
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25110982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATCAGTT TGTACCCCCA
  AGGTGGTTAA GGTTACAGTC TGCAGGGCAG GAGAGGTAGA AGAGGTGCCC CCAGTGTGAG
  ACAGACCATG ATGTACAAAG AGTCCTGACT GAGCTGTGCA TAGTCAGCGT GGAGAGCAGA
  GGAGTGGAAA GGTGTTAGCC TTTGAATTAG ATGTGTGAGT AAAGTTGAGC TGGTTTGAAA
  R
  CACAGGACCT GTTGGGGATC AGCAGCCTAG TATGGTTGGA GCATAAGTGC ATCTTTGTGA
  ATGAAAGAAA GTGGACTGGA AAGGTGTGTT GTGACTAGAG CTTTGAGTTC ATGGGGAGGA
  CTCTAGCCCT GGTGCCCATA TAGTGATAGA GAAGCCTTCC CTTCCAGAGT GGCCACTATG
  GGCCCCAGGA CTGAAGAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322121672	CHEV_7_26196576	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247844924					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25110982 () rs orientation: forward

Symbol	Name	Function Class
4732471J01Rik	RIKEN cDNA 4732471J01 gene	within coordinates
Cxcl17	C-X-C motif chemokine ligand 17	within coordinates
Rr155536	regulatory region 155536	1782 bp distal
Rr160903	regulatory region 160903	181 bp distal
Rr170192	regulatory region 170192	219 bp proximal
Rr170193	regulatory region 170193	1020 bp proximal
Rr172833	regulatory region 172833	1900 bp distal
Tssr2143	transcription start site region 2143	1240 bp downstream
Tssr2144	transcription start site region 2144	1390 bp downstream
Tssr2145	transcription start site region 2145	1408 bp downstream
Tssr2146	transcription start site region 2146	1426 bp downstream
Tssr2147	transcription start site region 2147	1469 bp downstream
Tssr71243	transcription start site region 71243	1250 bp downstream
Tssr71244	transcription start site region 71244	1275 bp downstream
Tssr71245	transcription start site region 71245	1288 bp downstream
Tssr71246	transcription start site region 71246	1300 bp downstream
Tssr71247	transcription start site region 71247	1345 bp downstream