rs247871117 SNP Detail

Summary

• ID
  rs247871117
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32534422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCTAGCTG TTCAATAACC ATACTTGGAG AATATACTAA
  AGTGGTCAGA GAAATTAAAA GGAAGAATAT TTTTCCTCTT TCTCTCCAAG GTCAAGTAGG
  Y
  CTCAGGTGTT GGGAGCCGCC CCCACATTCG CCGTCACAAG ATGGCGCTGA CATCCTGTGT
  TCTAAGTGGT AAACAAATAA TCTGCGCATG TGCCAAGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324312049	CHEV_13_32442308	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247871117					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32534422 () rs orientation: forward

Symbol	Name	Function Class
Rr271352	regulatory region 271352	within coordinates
Rr388214	regulatory region 388214	1 bp downstream