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rs247945302 SNP Detail
Summary
  • ID
    rs247945302
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr7:110366703 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GGGCAACTTT AAAGCAAGAA
    GAAAAAGATG CAGCATACTA TTCATTAAAA GGAAAATAAT TTTCTGGGTT GATGGTATGT
    GCCTTTAATC CCAGCAGTCT GGAGGCAGAA GGAGGGTCCA TATAGCAAAA TCCAGGTGAG
    CCAGGGCTGC ATAGTGAGAT CCTGTCGTAT TTTTAAATTA TTGCTTCATT TTTATCACAT
    M
    TTTAACATTT TAAGTGTGCT ATGTAATGTA TATTAGCAGT CATGTGAGTA TCATTGATAA
    ATATGTAGAT TGCAAGCATC AGGCTATGAA GTAGAAAGAA TAAAATTTGG TGCTTAAATG
    AGACAGCTGT GAAGTGAATG AAAACTCACA GTAGCAGTAA CTCTGTGAAA GAGGCACAAG
    TCAAAAGGTG GCTCCCCAGT                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss322398769 CHEV_7_117911010 CHEVERUD SCREENING_POP f SNP C A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs247945302 SNP C A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:110366703 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ampd3 adenosine monophosphate deaminase 3 710 bp upstream
B430319F04Rik RIKEN cDNA B430319F04 gene within coordinates
Cpgi19579 CpG island 19579 587 bp proximal
Rr653308 regulatory region 653308 297 bp proximal
Rr653309 regulatory region 653309 925 bp proximal
Rr653310 regulatory region 653310 1426 bp proximal
Tssr68503 transcription start site region 68503 567 bp upstream
Tssr68504 transcription start site region 68504 610 bp upstream
Tssr68505 transcription start site region 68505 642 bp upstream
Tssr68506 transcription start site region 68506 673 bp upstream
Tssr68507 transcription start site region 68507 1119 bp upstream
Tssr68508 transcription start site region 68508 1334 bp upstream
Tssr74265 transcription start site region 74265 1805 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory