rs248028470 SNP Detail

Summary

• ID
  rs248028470
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75209073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAACACC AGCTCAAAGA
  CAGCTGGTGG CTTTTTGATC GTTCCAGTCC TGCTGAGAAG GAATAGAAAC ATAAACCAAG
  ATCTGATTTT CAGCTCGCGC TCGTGCGCGC GCGTGCATAC GTGCATGTGT GTGTGTGTGT
  GTGTGTCTAC CACAATGTGT GAATTGAGGT CAGAGGACAA CTTACAAGAG TCAGTTATCT
  Y
  CATCCATCTC ACGGGTCCCT GGGATCAAAC TCAGGTTGTC TGGATTGGCA GCAAGTGCCT
  TTCCCCACTG AGCCACGTCA CTCAGCAGCT CATCTTGAGG CATAGAGCAA ATGGGCAGAG
  CCCAGTGGAA GCAGATCTGC AGACCCATTT TTCCATGATC ATCCCCAAAG GTTCTCTTCC
  AGTAAACTAG GGGGATCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323007836	CHEV_9_75149598	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248028470					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75209073 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197409	regulatory region 197409	528 bp proximal
Rr197410	regulatory region 197410	1128 bp proximal