rs248061184 SNP Detail

Summary

• ID
  rs248061184
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24024248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTATAAAG GAATGTTTTT AAAACTTTTA
  CGTAGTCACA TAAAATCATG TATGTGTGTA GAAGTGACTT GTCCAGAGAA TCAAGGGAGG
  TAGATCTACC ATACCCAACA GAACTTGTTA TTTAAAAAAA AAAATTGAAT GAGagagaca
  R
  agacagagac agacagagac agagagaaac agacagagag aGAATGGTAA GGGGAAAGTC
  AAAGTGTCTC ATGAACAAAC ATCAGTTCTT TTGCTAATGA GCTCAATGGC CTAGGAGAAG
  AGAGTCAGTG AGTTTTCTGA GGTCCATGGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324292301	CHEV_13_23932134	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248061184					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24024248 () rs orientation: forward

Symbol	Name	Function Class
Gm56568	predicted gene, 56568	1866 bp downstream
Rr475960	regulatory region 475960	806 bp distal
Rr475961	regulatory region 475961	723 bp distal
Slc17a3	solute carrier family 17 (sodium phosphate), member 3	within coordinates
Tssr4011	transcription start site region 4011	637 bp downstream
Tssr4012	transcription start site region 4012	533 bp downstream
Tssr118875	transcription start site region 118875	823 bp downstream
Tssr118876	transcription start site region 118876	795 bp downstream
Tssr118877	transcription start site region 118877	678 bp downstream
Tssr118878	transcription start site region 118878	645 bp downstream