rs248093406 SNP Detail

Summary

• ID
  rs248093406
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTAACTAA CTAACTAACT
  AAATAAATAA ATAAATAAAT AAATAGTAAA AAATAAATAA AAAATAAAAG CTCTTATTGT
  CATCATAGAG TCAGCTAAAC CATAGCCACA GCCACCACTC AGCAGACTAA CACACAAGCG
  AGCAGTCCTT GGTGTGATCA GTGCTTTCTC ATAATGTTTA GAAAAGTACA AAGACTTCCA
  K
  TAAGAACTTT CAAACTTAAG GCTGAAGAGA TGGCTCAGTG GTTAAGAGCA CTGGCTACTC
  TTCCAAAGGA CCCAGGGGTT CAATTCCAAG CATCCACATG GTAGTCTCAA CTGTGTGTAA
  TTCCAGTTAC GGGGGTGGGA GGGCTGACAT CCTCACAGAG ACATCCATGC AGGTAGAACA
  CCAATGTTAA TAAAATAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505146	CHEV_8_13214922	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248093406					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264922 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	842 bp upstream
Rr368495	regulatory region 368495	1086 bp downstream
Rr368496	regulatory region 368496	749 bp downstream
Rr659886	regulatory region 659886	1417 bp distal
Rr659887	regulatory region 659887	1459 bp distal
Rr659888	regulatory region 659888	399 bp distal
Rr659889	regulatory region 659889	798 bp distal
Rr659890	regulatory region 659890	1549 bp proximal