rs248113653 SNP Detail

Summary

• ID
  rs248113653
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28222737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAGAGTC CTCGAGGCCC
  CCGCAAAGCA TCAGGGCAGT TAATGTTCAG CACAGAAGAC CCCTTGCCTC CAGGGCTCGC
  AAGGGAAGGG ACACCAGCAC CAAAGTGAAT AAAATGCACT GCTGGGAATT ACCTGCCATG
  CTGGGAGGCA GAGCGGGAGC TTGGGTGTGG GGAGAGGGAG AGACAGCCCA CCTCCCCTGT
  K
  CAGATCCTCT GTCTCCTGGA AGGACTGACT GTGGGAGGAG AAGGAGGCTC TGTTCTCTGC
  TCCTCCAAGA GCTCTGGGCA GGATTTGGAT GCCTGCTTCC TGGGGACTTG CCTGCCTCTC
  TCAAACCTGG CAAGGCTTCC CTTCCCCTTC AAAGCCCAGG TTAGAGTCCA CCACCCCCAG
  AAGCTCCCAA CTCATCCCAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351165	CHEV_17_28140708	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248113653					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28222737 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	1401 bp upstream
Rr340975	regulatory region 340975	within coordinates