rs248116470 SNP Detail

Summary

• ID
  rs248116470
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:42774733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACTCTGTT CTCTACCCAT CAGCGTGGGT
  TTCTTTATCT TTGTGACAAG GTCAACATCA TGAGAAGTGA ATGAAATTGA ATTAAATAAG
  CCAGCCTAGG TGAACATGGC TTAAGACAAA TTGAAGAGAC CTTTAGAAGG AGAGCAGAAA
  A
  CACGACCATA GGCAACTGTC TGCAGGCAAA CTAGACCTCG GAAACCAAGG caactaaatt
  acatacaaag ccctggcatg cggtgtctgc tgatttccat ggtgaaaaga ccccagcata
  gccaattaca agcaagcatc ctgatgtcac                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322936137	CHEV_9_42671520	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248116470					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:42774733 () rs orientation: forward

Symbol	Name	Function Class
Gm55338	predicted gene, 55338	1308 bp upstream
Gm67530	predicted gene, 67530	within coordinates
Grik4	glutamate receptor, ionotropic, kainate 4	within coordinates
Rr677286	regulatory region 677286	1908 bp distal
Rr677287	regulatory region 677287	within coordinates
Rr677288	regulatory region 677288	1607 bp proximal