rs248165311 SNP Detail

Summary

• ID
  rs248165311
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:177152266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAGAAACT TGTGCTTCAT ACTTCTGCAA
  TGATTATGCA GGAAGCATTA ATTCCAGAGT TTATGTGTTC CCTTAGCTGG AAAGTTGTGT
  TGCcagacag acagacagac agacccagac ccagacccag acccagaccc CCTCCCCCCC
  M
  CACACACACA CAAACCACTT GATTTAGGGT CCCTTTCCAA TAAAACATAC CAAACAAACT
  CACACTCTTT CTCTTTCTGG GGAATGTTAA ATATTGTTAA TATGAGAGGT GTCTGTTCCA
  GGAACTATGA GCTACCACAT GCAAAGTGTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320158863	CHEV_1_179254831	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248165311					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:177152266 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1079	CpG island 1079	1454 bp distal
Gm36904	predicted gene, 36904	within coordinates
Rr423981	regulatory region 423981	1949 bp distal
Rr423982	regulatory region 423982	1336 bp distal