rs248186371 SNP Detail

Summary

• ID
  rs248186371
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109906574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGCTGCA TTACTAGGCT
  GCATATGATG GCACACACCC ACAATCCTGA GAGGGCATTG CCTGCTTATC ACCCTAGGCT
  CTCATGATCT CATCCTATGA TGGTATTATT CAATAACTCC TAAGTCAGGA CAAAATAACT
  AAAGATGCCA GTTTCCATGG AAGGAGCCTG TCGTTAGCTG TGTGAGCACT AGTTCTGGAG
  S
  AGGGATAGTG GGTGAGGACT GGGAGGACAC AGGGCTTGTC CACAATGGGA CAAGCCCCAC
  AACGGCATCA TTCCAGAGCC ACAAGTAGGA CCAGTAACAG CCTTGGCTTT TCTCCCCCCA
  CCCCCTCCAG TTCTGACTGC AGCTATGGAG AGCGGCTCAA TGCTATGAGC AGACCCGCTC
  AGCCCCCAGG CTGGCCACTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395870	CHEV_7_117450881	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248186371					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109906574 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	1573 bp distal
Rr159223	regulatory region 159223	1174 bp distal
Rr159224	regulatory region 159224	374 bp distal
Sbf2	SET binding factor 2	646 bp downstream