rs248231417 SNP Detail

Summary

• ID
  rs248231417
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33605631 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGcataca cacacacaca cacacacaca
  cacacacaca cacacacaat cacacaTAAT CTATGTGACC TACTGCTGTG TACAGAGACA
  CCTGAAAGTC ACTGGGCCTG CAGCACCGTG CGTCTCAGCC CTGTTCATCA AACCTGTTTA
  R
  TGGCTGAAAC ACAGACCAAG CCTACTGGTT GGCATGGCTG GACTTCAGAA ACGGACAGGA
  GCAAACCAGA ATTCCTCTGA GCCCTAGAAA GTACAACCAG ACTTCTATCT GTGGTTTTCA
  ACGTTCGTCC AGGGCCAAGC TGCCCTTGAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325139893	CHEV_16_33785347	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248231417					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33605631 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	436 bp downstream
Rr326609	regulatory region 326609	within coordinates
Tssr140846	transcription start site region 140846	1707 bp downstream
Tssr140847	transcription start site region 140847	1843 bp downstream
Tssr140848	transcription start site region 140848	1905 bp downstream