rs248261684 SNP Detail

Summary

• ID
  rs248261684
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92130990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGC CCATGAAGCC CTAGCTCACC
  R
  ACTCCCCTGT GGCCAAGTCT TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323071631	CHEV_9_92143775	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248261684					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92130990 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22145	CpG island 22145	1274 bp proximal
Gm67683	predicted gene, 67683	within coordinates
Plscr1	phospholipid scramblase 1	1275 bp upstream
Rr206878	regulatory region 206878	610 bp proximal
Rr383753	regulatory region 383753	488 bp upstream
Tssr86494	transcription start site region 86494	719 bp upstream
Tssr86495	transcription start site region 86495	741 bp upstream
Tssr86496	transcription start site region 86496	778 bp upstream
Tssr86497	transcription start site region 86497	812 bp upstream
Tssr86498	transcription start site region 86498	1089 bp upstream
Tssr86499	transcription start site region 86499	1102 bp upstream
Tssr86500	transcription start site region 86500	1124 bp upstream
Tssr86501	transcription start site region 86501	1146 bp upstream
Tssr86502	transcription start site region 86502	1187 bp upstream
Tssr86503	transcription start site region 86503	1228 bp upstream
Tssr86504	transcription start site region 86504	1258 bp upstream
Tssr86505	transcription start site region 86505	1359 bp upstream
Tssr90887	transcription start site region 90887	1535 bp downstream
Tssr90888	transcription start site region 90888	1573 bp downstream