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rs248326954 SNP Detail
Summary
  • ID
    rs248326954
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:115818384 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      tgtgtgtgt gtgtgtgtgt gtgtgtgtgt
    gtgtgtgtgt gtgtTGGGGg ggttactatt gctgtgatga aacaccatga ccaaatgcaa
    tggtttattt ggctaacgtt tccacatcac tgttcatcat tgaaggagtc agcacaggag
    Y
    ctgaaggcaa gggctgaagc agaggctatg gaggggggta ttgcttatag gcttgctcag
    cttgtttttt tatagaactc agggctacca gtccagggag tagccccacc cacagtgggc
    tgggccctcc cctgtcaatc actagttaag                                 
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss320893978 CHEV_3_115727653 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs248326954 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:115818384 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Extl2 exostosin-like glycosyltransferase 2 Intron
Rr583641 regulatory region 583641 1075 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory