rs248336731 SNP Detail

Summary

• ID
  rs248336731
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:77717415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGATGTGGC CGCAGGCTTG
  GTTTCCTTGG TCTCCATGGG GTAGTAGAAC GAATTCCAGC CTCTCTTGAA AAAACCAGAG
  GCTTAGAGGC CAGGCGAGTA GCTCATTTGG CAAAGCTCTT GCTGTGAAAA TTGGAATTCA
  CCCAGGAGAC AGAGACAGGA GATCCCCAGA GAAGCTGGCT AGCTAGACTA GCCAAACTGA
  Y
  AAGTTAAGGC AAGGAACCCT GTCTCAGTAT GTAAGATGGA GACACCTTGA GGAAGGAAGA
  TACCTGGCAT TAGCTTCTGC TCTACACACA TGTGCACACA TGTGCACACC TGAGTGGGGG
  GATGGGGAGA GAGAGAATGA GAGAGAGGAA GAATGAGAGA GAATGAGAAT ATTTGCCAAC
  ACTCACTACA TGCAGGCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323755843	CHEV_11_77640091	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248336731					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:77717415 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm40	DNA segment, Chr 11, Boehm 40	139 bp distal
Myo18a	myosin XVIIIA	within coordinates
Rr236558	regulatory region 236558	within coordinates
Rr245105	regulatory region 245105	1629 bp proximal
Rr251684	regulatory region 251684	within coordinates