rs248417128 SNP Detail

Summary

• ID
  rs248417128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185318396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCAGTC TCCATCCCCA
  TTACAAGTGT TCCTCACTAA TCTTGCTTCA GTGACCTTTT GCTGGAGAGA CGCTGGGTCA
  GACAACCTGG GATACCTGAG ATGCAGAAAC GCTACTGTAG AGAACAGCAT GATGGTACTT
  GCTGTGTGTT CCAAAGGTAA AAGTACTGTT GAGCCTCATT CCCCAAAGCT GCAAGCTTGG
  Y
  CTTACCTGTC TCATGGCAGC CCAAGCTATG ACATGGCACG TCTCAGGAAT GTGTATCATC
  TGAATCGGCT GAGTTCAGAC TGCCTTCCTG TCCCACATTT TTCTGTGTCT GTTGCTCCCA
  ACTATTTCGC ACTTCCTGTT GCTCCTCCTC CTACTTGCTG AGTGACCACA CACTGCTTCC
  CATGGTCTGT ATCAACAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320177541	CHEV_1_187410078	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248417128					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185318396 () rs orientation: forward

Symbol	Name	Function Class
Rr425414	regulatory region 425414	810 bp distal
Rr425415	regulatory region 425415	1447 bp proximal