rs248425885 SNP Detail

Summary

• ID
  rs248425885
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:63566000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTCACATTG GTAGGGTAGC TGTGACCCCA
  CCTCCCAATG GACTATGTCT GCCCAGCAGA AACAGCCTTC GAGCAGTTCC AAGGACTTAG
  GCCACACGCG TAACAGCATA CATAGGCCTG CCAACACCCA CTTGTATAGC AGCTCCCTGG
  R
  TCCCTCTTTC TCCAGCCATC AGCATGTTTC CTCTCTAGTG CTGTGGGGTC CAGACGAAGC
  ACAACCCTCA CACTTAAGCA GCAGAAACTC TAGGACTATA AGGGGTAAGG TAATATAGAG
  CAAAGGCCAA GACCTGGCAG GGGACCAGCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322233692	CHEV_7_71061138	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248425885					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:63566000 () rs orientation: forward

Symbol	Name	Function Class
E030018B13Rik	RIKEN cDNA E030018B13 gene	605 bp upstream
Gm53391	predicted gene, 53391	within coordinates
Klf13	Kruppel-like transcription factor 13	Intron
Rr647715	regulatory region 647715	79 bp proximal
Rr647716	regulatory region 647716	1237 bp proximal
Tssr66988	transcription start site region 66988	628 bp upstream
Tssr66989	transcription start site region 66989	989 bp upstream