rs248427199 SNP Detail

Summary

• ID
  rs248427199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:143282733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGACAGTTGC TGGGCATAAC
  TCTTGTTTGT ACAAAAAATA AACACACACA CATATACACA CACACTAATT TATGTTCCTC
  CTTCAGGAAA TATTCTCCCT GCCAAGGTTA AGGACGCCAC CATAATCAGA GACATCACCA
  GTCTAGAAGG TAAGGTGTAT TTATGTCCTT AGTAAAAATG GTAAATGCTG AGACCATCAG
  R
  ACAGTCCTTA AGGCTGTGGG AAAGAACTCT GAAAACATGC GTTTAAGAGT ATATAATTCC
  TCAATTATGC AAAATATAAG GTTGCAATAA TGAATTAGAC AAGGGGCTTC ACGAACCTAA
  AAGAACAGAA GCAGCTGCAC TTTGAATCAG CTTGTCAGAA AGATACAAAG TCAGGCAGAT
  AAAAAGGCAG GCAGATTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322052289	CHEV_6_143285527	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248427199					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:143282733 () rs orientation: forward

Symbol	Name	Function Class
Rr380238	regulatory region 380238	within coordinates