rs248459096 SNP Detail

Summary

• ID
  rs248459096
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84354871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTATTTGA GTAGCACTCT
  ACGTGACTAC CAAGGTTATA TCCACTTAAA GGACTGCCGG CATAGCAAGC AGAAGTAGGA
  AACAACTTTG GGAAGGAGAT GCCCAGTGAG ACGCAATACC TCCCCTACAT GCACGCAAGC
  ACTTCTATAC GCAAACCCCG CTCTTCACGC TCATCAAATG GATGTAGGAA AGCAAGAAAG
  T
  CCAGGTTCAT CATGATGGTG GAGAAGACCT ATCTTAAGAC ATAAATCCTC TAAAGATTTT
  CCACCGTCAA AGACATGTGC TACAAACATA GCTATAATTA AAGCACATGT AGATCTATCC
  AAGACATTTT TTTTTTCGTT TTCCACACTT ATCTCAAACA AGCAGCCCAT TGCAGCAACA
  AAATCTTCCT ATATTGCTCC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260812	CHEV_16_84558228	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248459096					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84354871 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	299 bp upstream
Rr404934	regulatory region 404934	1674 bp upstream
Rr518505	regulatory region 518505	270 bp proximal
Rr518506	regulatory region 518506	371 bp proximal
Rr518507	regulatory region 518507	1662 bp proximal
Rr518508	regulatory region 518508	1793 bp proximal
Tssr139145	transcription start site region 139145	815 bp downstream