rs248478959 SNP Detail

Summary

• ID
  rs248478959
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:66988656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGTACTT ACATATGATA
  AATAAATAAA TTTTTTAAAA AAGGAATTCA TTTGTCTTCT GGATATGGCA GCAGTTACTG
  ATTGATTATC TAGAATAAGC TAATGGAATA ACATCTTTGC TTATTCAGTG ATCTAGACCA
  GGCAATGGTA GAGAACCCTA ACTCTGAGAG TAGCCACTTC AGGGGTGACA TTCTGTTAGA
  Y
  GCTTGGCAGA GAGTTCACTG ACAGAACCTC TCCACGATGC TGCTGCAGGT GCTAGCTGAG
  TGGAAGACGA AGTGTGAGGA GAGCCAAGCC GAGCTGGAGG CAGCTCTCAA GGAATCCCGG
  TCCTTGAGCA CTGAGCTCTT CAAACTGAAG AATGCCTATG AAGAAGCCTT GGATCAACTT
  GAAACCGTGA AACGGGAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323718348	CHEV_11_66911332	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248478959					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:66988656 () rs orientation: forward

Symbol	Name	Function Class
Mir6923	microRNA 6923	1974 bp upstream
Myh3	myosin, heavy polypeptide 3, skeletal muscle, embryonic	within coordinates
Tssr102156	transcription start site region 102156	64 bp upstream
Tssr102157	transcription start site region 102157	738 bp upstream