rs248484984 SNP Detail

Summary

• ID
  rs248484984
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111937209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGAGCGA GGTAGGGAGC
  CAGCCCTGAC TCAGTGGAGA GTCAACTGTT CTATGAACAA GAGTTAGCTT GGATCGAGGG
  CACATGTTTA ACCTCCAGGA TGAGCCAAAC TGTTCCGCTG AGCTCACAGT CTGCTGTTGG
  CCTGTCTCCT GCAGAGGTCA GCATACAGGG CTGAACGCTC CCTGTCTGAA GGTCCCTGAC
  W
  CCCAGTTTGC TTCTGTGTTC CTGAGCTGGT GTACCTCCAG CTTCGTGCTG TTCTCTTAGC
  AAAAAAAAAA AAAAAAAAAA CCCTCCAAGT TGTCCCTCAT TTTGTTATGT TCCCATTGGC
  ACCCTGAGCA TCTGTAGGGA GATATTCGTA AAAAGAATCT CCAAAGAAAG ATGAAATCTT
  ATTACGTGGC CCCCTCCAGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322412432	CHEV_7_119481516	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248484984					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111937209 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	1396 bp downstream