rs248514574 SNP Detail

Summary

• ID
  rs248514574
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156136593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGCATCCC CTTAGAGGCT
  GGGCATGACA AGTCACTCAC GTGGCCTTCC CTAGTCTAAG CTGCCAGTGT GGGAGCTTGT
  GCTTGGCAGG TCTGAAGGAG CACCATTTCT CAGCTGTGCC CAGAGTCCTA TGGCGATAGG
  AGTGCCCCAT AGGTTGTCAT TCTCTACTTG TGAGATCTGC CCTTCTTATG CTGTGCTGGG
  R
  GTCGGGGTCT CTGTGGTCAG TCCAGTGCTG GATCAAGAGA CCTCTCTGCT CTAGACTAAT
  AGTACAGTGG GACTGCAGGT GGGCTGGGGC ACATAGCACT TCTACTAAAC CCTGGGCTGA
  GTTATTGGGG CTGAAAGCCT CCAGGCTGGA CAGGTAGCTC ACCCAACCCT GGAGAGGCTT
  TGGACCAGCA GCCAGCTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321444937	CHEV_4_155426245	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248514574					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156136593 () rs orientation: forward

Symbol	Name	Function Class
Gm13648	predicted gene 13648	579 bp downstream
Mir429	microRNA 429	1769 bp downstream
Mirc4	microRNA cluster 4, including Mir429 through Mir200b	1769 bp proximal
Rr93557	regulatory region 93557	1192 bp distal
Rr97568	regulatory region 97568	1 bp distal
Rr106662	regulatory region 106662	1873 bp distal
Tssr45000	transcription start site region 45000	1663 bp upstream
Tssr45001	transcription start site region 45001	1630 bp upstream
Tssr45002	transcription start site region 45002	1375 bp upstream
Tssr45003	transcription start site region 45003	1364 bp upstream
Tssr45004	transcription start site region 45004	1340 bp upstream
Tssr45005	transcription start site region 45005	1777 bp downstream
Ttll10	tubulin tyrosine ligase-like family, member 10	1319 bp upstream