rs248526870 SNP Detail

Summary

• ID
  rs248526870
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59700869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cagtgggta agagcacccg actgctcttc
  cgaaggtctg aagttcaaat cccaccaacc acatggtgac tcacaaccac ccgtaatgag
  atctgatgcc ctcttctgga gtgtctgaag acagctacag tgtacttaca tataataaat
  R
  aataaatcta aaaagaaaaa aagttgcctt ggtcatggta tttgttcaca gcagtaaaac
  cctaactaaa acaGATACtg tgctggttaa tcttctgcca atttgacaca aactggagtg
  ccctgggaag agggaccctc aactgaagaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319738947	CHEV_1_59718554	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248526870					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59700869 () rs orientation: forward

Symbol	Name	Function Class
Gm71026	predicted gene, 71026	172 bp downstream
Rr16806	regulatory region 16806	69 bp distal
Rr22465	regulatory region 22465	1669 bp distal
Rr27302	regulatory region 27302	462 bp distal
Rr371358	regulatory region 371358	1793 bp upstream
Sumo1	small ubiquitin-like modifier 1	within coordinates
Tssr11830	transcription start site region 11830	729 bp downstream