About   Help   FAQ
rs248534134 SNP Detail
Summary
  • ID
    rs248534134
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr15:100166531 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AGTTTACTAC TCTTTCATAA
    CATCATTGAG GACATCTAGT AGGTCTCCTG AAAGTACATT CCAGGGGCCA GGGGTCAGGG
    GTCTTTTTTC TTTGTTTGTT GGTGTTTAGC TGTTTTGTTT TGTTTCTTCT TTCTCCGATC
    CGCTCACTCT GCTCCAAAGA TTTATCTATT TGTTATTTGT AAGTGCACTG TAGCTGTCTT
    Y
    GGACACCTCA GAAGAGGGCA TCGGATCCCA TTGCAGATGG TTGTGAGCCA CCATGTGGTT
    GCTGGGAATT AAACTCAGAA CCTTTGGAAG AGCAGTCAGT GCTCTCAACT GTGAGCCATC
    TCTCCAGCCC CCCAAACCAG ATGTTATTTG TTTTATGTTT AATTTTTTTC AATTTACCTT
    ATCTATCTAT CTATCTATCT                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325082831 CHEV_15_100099081 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs248534134 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:100166531 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm56733 predicted gene, 56733 1392 bp upstream
Rr391198 regulatory region 391198 within coordinates
Tssr4717 transcription start site region 4717 1438 bp upstream
Tssr133109 transcription start site region 133109 533 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory