rs248554935 SNP Detail

Summary

• ID
  rs248554935
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:5081277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACTA TCTCTAAAAT GTCTTGTTTC
  R
  GTAAGGTCCA AATCCTGATT TTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322095910	CHEV_7_5029880	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248554935					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:5081277 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18280	CpG island 18280	1658 bp proximal
Epn1	epsin 1	1957 bp upstream
Rr167875	regulatory region 167875	1323 bp proximal
Tssr64418	transcription start site region 64418	1076 bp upstream
Tssr64419	transcription start site region 64419	1192 bp upstream
Tssr64420	transcription start site region 64420	1936 bp upstream
U2af2	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	within coordinates