rs248600079 SNP Detail

Summary

• ID
  rs248600079
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120087305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATACCCTGC ACTTTACCAG
  TTTGTTTGCA AGCATTGTCA CCAGTCCAAA TTCATTTCTA AATTTAAAAA CCAAACAAAC
  AAACAATATT GATTTGCTTC TGTCACAAGG CCTGGGATGA ACCATCCCTG GTGGTTCTAG
  CTATGTCCTG TGCAGTTGCG ACCTTGGGGT CACTACTTGT CCAGTGTCAT GTTCATTGTT
  K
  ACTAGTTTTC TCAGACTGAC CAGCTAGCTT AGAATAAAGA CAATGTTGCA GCGTCTTCCA
  AGAAATCCTC ATATTTTTCT GTATCTCTGC AAGGTGCTCA GTTATTGGCA AACATGATAA
  TCTGATTATT AAAGTCATTT CTGACCAGGC ACTTGGCTCG ATGGTAGTAA TCCGCACAGG
  GAGTCTATGC GGTGTGTGGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323226210	CHEV_9_120167357	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248600079					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120087305 () rs orientation: forward

Symbol	Name	Function Class
Gm38642	predicted gene, 38642	1193 bp downstream
Gm47059	predicted gene, 47059	within coordinates
Rr207892	regulatory region 207892	1097 bp proximal