rs248600839 SNP Detail

Summary

• ID
  rs248600839
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:111275376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAATTTGG TTTATAAGTG
  TGATATGCTG TGCTCTGCCT AAAACCCTTT CCACAGAGTC TTTCATGACT GAGGCCCACT
  CTACGCTCTT CTTACTCCCA ATCCCCTGCT TCGTACTTTC TACTTAACAC CTTTTTACAT
  AAACACAAGA TGCTCAACCA AGCTTCAACG GCCCATTTTA CCCCGAAAGA CTCTTCTTTT
  T
  CTCAATATAT TTATCCTCGA GAATTTAGTT CAGTTCCAAG GATATTTGAT TAGTCTTTCT
  GACCCTTGGT TAACTTTCAC TTTTTTCTTC CCACAGTACA GCATCCATGT GCCTCTCCCT
  CTAGATCATG AGTCATGGTA GAATGTGCAC TTCTGGAAAC AACAGCAGGT TCCTTTTTCT
  TCAGAGCTGT GTGCAGAACC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323473597	CHEV_10_110876571	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248600839					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:111275376 () rs orientation: forward

Symbol	Name	Function Class
Rr225746	regulatory region 225746	1319 bp proximal
Rr229875	regulatory region 229875	within coordinates