rs248616238 SNP Detail

Summary

• ID
  rs248616238
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAATTAGA CCTGACTTTC
  AAACATGACT GCTTCCTTCT AAAAACTGTG TGTCCTAAGG GCCTAGCTAT ATGCCAGCTA
  GAGAAATTAA AAGTCTATGG CATGCCTGCA CTCCAGATGG ATCAATCACA CAGACCTTGA
  AGGTCTTTGG ATGTGATCCC TTGCCAGAGC AGCCATATTG CTGGATTAAA ATTCCTCTAC
  G
  AAATCAAAAT TAAAGAAGAA AAGGCATTTT TCATGTTCTT TCCTGGGAGG AGCTTAGACA
  AATGGCCAAT GACCAGAAGT CAATGTCGGA AGTCATAAGA CCACACATGG TCATAAGACC
  ACACATGGCC CACCCAGCAG CACAATTGGA ATTTACCAAC TGGTAGACTA TTGACCACAT
  GAGTACAAGA AAAGATGGAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260795	CHEV_16_84557261	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248616238					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353904 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1266 bp upstream
Rr518505	regulatory region 518505	1237 bp proximal
Rr518506	regulatory region 518506	1338 bp proximal
Tssr139145	transcription start site region 139145	133 bp upstream