rs248620569 SNP Detail

Summary

• ID
  rs248620569
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4294374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCATTTTC TCCTGCTAAT
  TTGTAGAGGT TAATGTAAGC TATAAAGCAT TAAGAGCTGG GAGATAGCTC AGTGCTAAAA
  CTCTTGCCTA GCAACCATGG GACTGATTCT CCAGAACTCT TATAAGATTC CAAGTGGATG
  TGGTGCTCTC CTCTATCTCC AGCCTTGTCG GCAGACAGGG GATCCCCAGA ATAATCCGGC
  W
  GGTGAAAATA GCCATATTGG TGAGCTCTGA TCTGATGGAG AGACCCTCCC CTAGGAAATG
  AGGTACAATT GCTAAGAGGA TGAAGCCTGA TAAAAACCTC AGGTTTGCAC ACACACACAC
  ACACACACAC ACACACACAC ACACACACCC ATGCAAACAA GAATAAACAT ATACATTCAT
  ACATATATTT ATTCATTCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213458	CHEV_13_4243621	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248620569					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4294374 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	within coordinates
Gm61344	predicted gene, 61344	within coordinates
Rr474456	regulatory region 474456	583 bp proximal