rs248664416 SNP Detail

Summary

• ID
  rs248664416
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100095921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGAAATC CTTTTAAAAT CATAGATGGA
  ACCTTTCCCA AAGATTAATA GTAAAGATGG CTACTTTCCA ATTTTTATAA GAAAAAAAAA
  AGTAggggct ggagaggtga ctcggtggtt aagagcactg actgctcttc tagaggtcca
  R
  agttcaaatc ccagcaacca catgttggct cacaaccatc tgtaatgaga tctgatgccc
  tcttctggag tgtctgaaga cagctacaat gtacttatat atagtaaata aatttaaaaa
  gaaagaaaaA AAAGTAAATT GTACATGGCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320848245	CHEV_3_99992528	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248664416					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100095921 () rs orientation: forward

Symbol	Name	Function Class
Gdap2	ganglioside-induced differentiation-associated-protein 2	within coordinates
Rr64421	regulatory region 64421	680 bp proximal
Rr69692	regulatory region 69692	1280 bp proximal
Rr82369	regulatory region 82369	855 bp proximal