rs248731100 SNP Detail

Summary

• ID
  rs248731100
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88903537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAATTCAG CATTCCAGCC
  AAGGACTAGA GCATCCAGAG TGGACAGCTC CTCCCACCTC AACCAATGGA ATCTTGAGGA
  CCCCCCCCCC CCTGCCAAGA TGTGCTTTAA CCCGACCCAT CACATTGGGT TTTCCTCTCA
  CCATATGAAA ATCATTAAAC CGTTACAATT TTCTACCAGG TTCCCTTAAA ACCTTTAAAG
  R
  GAAAACACAT TTATTTATTC AGTATGGATA CGTGTATGTA TATGTGCATG TGTGTGGACA
  TATGCACTCT GATGTAGAGG CTAAGGTCAG AGGACAACTT ATGGAAGTCA GTTTTCTCCT
  TCCACTGTGT GGGTCCTGGG GATAGGACTC AGGTTTGGTG GCAAGCTCCT TTACCCACAG
  AGCCATCTTG ACAGAGTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783787	CHEV_11_88874025	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248731100					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88903537 () rs orientation: forward

Symbol	Name	Function Class
Trim25	tripartite motif-containing 25	within coordinates
Tssr104066	transcription start site region 104066	1802 bp downstream
Tssr104067	transcription start site region 104067	1734 bp downstream