rs248735870 SNP Detail

Summary

• ID
  rs248735870
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128772077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTCACTGA GCTCAGCAGC CAACGTCACC
  CACACCCCAC CCCTACCCCT TGCAGTCACT GAAGCTTTGG TTACTATTCT GTCCGAAGGC
  CTGGGGTTGT TAGACGCCCG GAGTGAAGCC ATGAAGCAGA GTGTGGCTGG GGCAGAGATG
  W
  CGGGGTGTTC TTATTCCAAG AGGACCTGGC TGGGTTCTTT CTTCCATGAG TAGGATTGGT
  CCTTTAGCTT CTGTCCATGT GAGCATCTTT GTTCCTTCCT GCACTTGGCC TTTAGGGGAG
  GTGTGAACAT GCACACTCCT GCTTCTTTGG                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323536829	CHEV_10_128373264	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248735870					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128772077 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2425	CpG island 2425	1944 bp distal
Gm67752	predicted gene, 67752	within coordinates
Itga7	integrin alpha 7	within coordinates
Rr441375	regulatory region 441375	within coordinates
Rr441376	regulatory region 441376	599 bp distal