rs248771058 SNP Detail

Summary

• ID
  rs248771058
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATGTTTTC ATAACTTCAA ACAGACAGCT
  GTAATTATct tcccaccaaa gtccctgcca aacaccattt tttttctgtc tctacaaacg
  tgtttactct agaggccttt cagaagcagc atcagacaat actGGATATT CTGCATcctc
  Y
  ctccctccct tcctccctcc ctccctccct ccctccctct ctaaattgct ctcttaagtg
  ttctcttttt aatttctgat ctcctgagag ttgggcatat cctatctctg actcattcag
  tcaaaccctt ctctgattca tcactttgtc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260789	CHEV_16_84556905	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248771058					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353548 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1622 bp upstream
Rr518505	regulatory region 518505	1593 bp proximal
Rr518506	regulatory region 518506	1694 bp proximal
Tssr139145	transcription start site region 139145	489 bp upstream