rs248801228 SNP Detail

Summary

• ID
  rs248801228
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13258197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATTAAAA CAGAGCCAGC
  AAGTAGGCTC AGGAGGTTAA AAAACCAAAT GTTCACATAA CCTCATGGCC TGAGCCCCAT
  CCCCAGAGCC CGTGTAAATA AGCCAGATAC AATGGCTGAC ATCTGTAACC CCAGCAGCTC
  TATGTCAAGA CGAAAGATGG AGACAGAAGC TCTTGGGCCA GCTTACCTGG AGCACACTAC
  R
  TGCCAGAAAC AAGAAGGGAA ACCCTGCCCC AAAACCAGTG GAAGAAGAGA ATCGACTCTT
  GAAAGTGGTC CTCTGACCTT CACACACACA GTGTGGCACT CATACACCCA CACTCACACG
  AGCACACACA TGTGCACACA CAGTGATAAT AAAATGTTAA AATAGACCAG TATAGCTAGT
  CATGGCGGCT CATGACTAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505101	CHEV_8_13208197	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248801228					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13258197 () rs orientation: forward

Symbol	Name	Function Class
Rr381722	regulatory region 381722	within coordinates
Rr659881	regulatory region 659881	1426 bp distal
Rr659882	regulatory region 659882	184 bp proximal
Rr659883	regulatory region 659883	445 bp proximal
Rr659884	regulatory region 659884	565 bp proximal
Rr659885	regulatory region 659885	1323 bp proximal