rs248824851 SNP Detail

Summary

• ID
  rs248824851
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88901369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagggaatc agatctcatt gcggatggtt
  gtaagccacg atatgtggtt actgggaatt gaactcgggg ccttcagaag agcagtcagt
  gctcttaacc gctgagccat ctctccagcc ccAGGTGGAG GCTTTTTGCT ACTCCAGGGA
  K
  CTCAGTCCTA TGCCTAGAAA CTACTGTGTT CCGTGAGAAA GGATTCAAAG CCCTTGTCTG
  AGCCCCCTTC TTAAAGTTCT TAAAAGAGCA CTCCAGCTCG GTTCAGGATC AGAAACCTTG
  GCCGTGTGAT TGAGGCAGGA AGTTGGATTT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783764	CHEV_11_88871857	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248824851					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88901369 () rs orientation: forward

Symbol	Name	Function Class
Rr454279	regulatory region 454279	670 bp distal
Rr454280	regulatory region 454280	1803 bp proximal
Trim25	tripartite motif-containing 25	within coordinates
Tssr104066	transcription start site region 104066	350 bp upstream
Tssr104067	transcription start site region 104067	426 bp upstream