rs248830879 SNP Detail

Summary

• ID
  rs248830879
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4273984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagtaccga aatttgcaca tgatgtgata
  gtatatgtaa gtaacccccc aaatcctacc agttggctgg atacacgatt aactcaaaaa
  tcagtagccg tcctatatac acataacaaa tgggctgaga aagaagtcag agaaatacct
  Y
  tcacaatagc cacaaataat ataaactatc ttggggggga tgaagggaga gagtactggg
  agagacaact ttgattgggg gggggggagc gcattttggg ctcaaggtag aaacctagtg
  caatggaaac ttccagggat ctatgagagt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873745	CHEV_12_4223984	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248830879					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4273984 () rs orientation: forward

Symbol	Name	Function Class
Cenpo	centromere protein O	within coordinates
Gm17816	predicted gene, 17816	1801 bp upstream
Gm48210	predicted gene, 48210	623 bp downstream
Tssr112550	transcription start site region 112550	1737 bp upstream