rs248860211 SNP Detail

Summary

• ID
  rs248860211
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:109759330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAAAATCT TACAAATGTG ACACTTGATA
  ACTAAGATTA TTAGAAATTG CTACAGAAAA ATTTGCATGA AATATGTGTA TATGTATTTA
  TACACAAGTG CTGGAACCAT TTGCACGTAT TCACAAACTC CTCAGCTCAT CAGAATTGAA
  W
  GATTAATGTC CACTTTCAAT CAGTATTGCA AGGGTGCCTG GTGACATCGA ACATTTTATG
  CTCATTTATA GTATCAATGG ATTAATTATA TGTGGCTCAG AGCATATATT GAGCTAGGCT
  TTTGTTCTGA CCACCTTACT GAGTAAACCC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320870669	CHEV_3_109654932	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248860211					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109759330 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates
Rr65057	regulatory region 65057	1071 bp proximal