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rs248860211 SNP Detail
Summary
  • ID
    rs248860211
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr3:109759330 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      TAAAAATCT TACAAATGTG ACACTTGATA
    ACTAAGATTA TTAGAAATTG CTACAGAAAA ATTTGCATGA AATATGTGTA TATGTATTTA
    TACACAAGTG CTGGAACCAT TTGCACGTAT TCACAAACTC CTCAGCTCAT CAGAATTGAA
    W
    GATTAATGTC CACTTTCAAT CAGTATTGCA AGGGTGCCTG GTGACATCGA ACATTTTATG
    CTCATTTATA GTATCAATGG ATTAATTATA TGTGGCTCAG AGCATATATT GAGCTAGGCT
    TTTGTTCTGA CCACCTTACT GAGTAAACCC                                 
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss320870669 CHEV_3_109654932 CHEVERUD SCREENING_POP f SNP A T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs248860211 SNP A T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:109759330 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ntng1 netrin G1 within coordinates
Rr65057 regulatory region 65057 1071 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory