rs248872180 SNP Detail

Summary

• ID
  rs248872180
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116992128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAAGGGT TAAACTAATT
  AACCGACTTG TTGCCAGGAC TGAGTTATTT AAATGAGTTT GAAAGAGGCA GGGTTACATT
  TCACCTTCAT TGATTTTGTT TGTTTGTATG TATGTTTGTT TGTTTGTTTG TTTTTTAAAT
  TAAAGTGTTG GCCCAGGGGC CAGCAAGATG GCTCACTGGG GAAGGGTGTG TGCCTGATCA
  Y
  CAGAATTTGA TACCTAGAGC AGACATGGTG TGAGGGGTGT CCTCTGATCC CTCGCTCCCC
  GGCATACACA CACACACACA CACATAAACA CATACACAAC CTATATCTTT CACTTTGTTT
  TTAAAATGGT CACCCATCTC TCTCTGCCTC AGCTCCTCCT CCAAAATACA CACGATATCA
  TAGAGATGTT TTGAGACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323494370	CHEV_10_116593279	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248872180					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116992128 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	1006 bp upstream